DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and dharma

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_571054.1 Gene:dharma / 30170 ZFINID:ZDB-GENE-990415-22 Length:192 Species:Danio rerio


Alignment Length:170 Identity:51/170 - (30%)
Similarity:67/170 - (39%) Gaps:53/170 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 KIHRFSVDNIM--EMKHDAYSKGKMAMELSSNFGPTG----------AGC-GGADRPA-----PC 102
            |...||:|.|:  ..:..|.|.|......|.:|  .|          .|| |..||.|     ||
Zfish     5 KFSNFSIDYILGDTSRQTAESPGVDHPASSQDF--QGHLRKLDLLYQEGCRGHCDRAALMVNFPC 67

  Fly   103 ------------------------------SGNLPAGGGHH--SRKPR-RNRTTFSSAQLTALEK 134
                                          :|...|...:|  :::|| |.||.|:..|...||:
Zfish    68 PSWPGMYCCCVPVSYYQSTYYAGQPWPYAVAGCETAENHYHTIAQRPRGRIRTVFTDNQTEQLER 132

  Fly   135 VFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRR 174
            :|..|.||....|.|||....|||..|:|||:||||:.:|
Zfish   133 LFAVTDYPTVETRAELAQNTGLSEETVRVWFKNRRARRKR 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 27/56 (48%)
dharmaNP_571054.1 Homeodomain 117..172 CDD:459649 26/54 (48%)

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