DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and pitx2

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_571050.1 Gene:pitx2 / 30164 ZFINID:ZDB-GENE-990714-27 Length:314 Species:Danio rerio


Alignment Length:333 Identity:74/333 - (22%)
Similarity:113/333 - (33%) Gaps:146/333 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 HQSHN----------LESEDKLEDREESGRNLDKIHRFSVDNIMEM-------KHDAYSKGKMAM 80
            |..||          |.....|:..:   |::|..||..|..:.:.       |....||.:   
Zfish    12 HHHHNHHVTGSKHAPLSMASSLQPLQ---RSVDSKHRLDVHTVSDTSSPESVEKEKGQSKNE--- 70

  Fly    81 ELSSNFGPTGAGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAF 145
              .||..|:                       ..::.||.||.|:|.||..||..|:|..|||..
Zfish    71 --DSNDDPS-----------------------KKKRQRRQRTHFTSQQLQELEATFQRNRYPDMS 110

  Fly   146 VREELATKVHLSEARVQVWFQNRRAKFRRNERS-------------------------------- 178
            .|||:|...:|:||||:|||:|||||:|:.||:                                
Zfish   111 TREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPSYTYNN 175

  Fly   179 --------------------------VGSRTL---------LDTAPQLVPAPIS----------N 198
                                      :.|:|:         :..:..:||:.::          |
Zfish   176 WAAKGLTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLN 240

  Fly   199 NMHKYAN------MPHPH-P-QPPPPPGAYA----LNFGPLELRSCQNYTNCYGGFG----SSGA 247
            |::..:|      :|.|. | .||.||..|.    .:...|.|::.|     :..||    .:.|
Zfish   241 NLNNLSNPSLNSGVPTPACPYAPPTPPYVYRDTCNSSLASLRLKAKQ-----HSSFGYASVQNPA 300

  Fly   248 SGSGVCSF 255
            |....|.:
Zfish   301 SNLSACQY 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 32/55 (58%)
pitx2NP_571050.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..93 22/111 (20%)
Homeodomain 83..139 CDD:459649 32/55 (58%)
OAR 272..289 CDD:461067 3/21 (14%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 276..289 3/17 (18%)
Nuclear localization signal. /evidence=ECO:0000255 282..286 1/3 (33%)

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