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Protein Alignment CG9876 and Lhx2
DIOPT Version :9
Sequence 1: | NP_611756.1 |
Gene: | CG9876 / 37668 |
FlyBaseID: | FBgn0034821 |
Length: | 275 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006234134.1 |
Gene: | Lhx2 / 296706 |
RGDID: | 71076 |
Length: | 414 |
Species: | Rattus norvegicus |
Alignment Length: | 110 |
Identity: | 41/110 - (37%) |
Similarity: | 55/110 - (50%) |
Gaps: | 19/110 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 97 DRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARV 161
|:|.| .|:|.:|.||:|...||..::..|...|.|||...::||.|..|::..:
Rat 265 DQPYP-----------SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVL 318
Fly 162 QVWFQNRRAKFRRN---ERSVG----SRTLLDTAPQLVPA-PISN 198
||||||.||||||| :.:.| |...|.|.....|| .:||
Rat 319 QVWFQNARAKFRRNLLRQENTGVDKTSDATLQTGTPSGPASELSN 363
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
0 | 0.000 |
|
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