DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and Dbx1

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_001009644.1 Gene:Dbx1 / 292934 RGDID:1308896 Length:335 Species:Rattus norvegicus


Alignment Length:186 Identity:56/186 - (30%)
Similarity:78/186 - (41%) Gaps:56/186 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 YSKGKMAMELSSNFGPTGAGCGGADRPAPCSGNLPAGGGHHSRKPRR---NRTTFSSAQLTALEK 134
            |.:|.....:.|::.|  |.......|...|..|.|.|     ||||   .|..||..|..||||
  Rat   141 YFEGSFQPFIRSSYFP--ASSSVVPIPGTFSWPLAARG-----KPRRGMLRRAVFSDVQRKALEK 198

  Fly   135 VFERTHY---PDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERSVGSRTLLDTA---PQLVP 193
            .|::..|   ||   |::||:|:.|.:::|::||||||.|:|.::    .|.||.:.   .|.:|
  Rat   199 TFQKQKYISKPD---RKKLASKLGLKDSQVKIWFQNRRMKWRNSK----ERELLSSGGCREQTLP 256

  Fly   194 APISNNMHKYANMPHPHP------QPPP----------------PPGAYALNFGPL 227
            ..:           :|||      |..|                ||....|..|||
  Rat   257 TKL-----------NPHPDLSDVGQKGPGDEEEDSPGASLAYHAPPDPRHLLEGPL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 27/61 (44%)
Dbx1NP_001009644.1 PRK12323 <49..182 CDD:481241 14/47 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 56..102
Homeodomain 184..238 CDD:459649 25/56 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..335 16/77 (21%)
Blue background indicates that the domain is not in the aligned region.

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