Protein Alignment CG9876 and ind

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Alignment Length: 192
• Identity: 50/192 - (26%)
• Similarity: 72/192 - (37%)
• Gaps: 49/192 - (25%)

  Fly    11 LPVGNPGNFYYGPTVSGEIYSSHQSHNLESEDKLEDREESGRNLDKIHRFSVDNIMEMKHDAYSK 75
            ||:..||:|...|:.|                       |..:||..:.|........||::
  Fly   158 LPLPEPGSFCTSPSAS-----------------------SSASLDYTNNFDEPQGKRFKHES--- 196

  Fly    76 GKMAMELSSNFGP-TGAGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERT 139
                 ..|.|..| .....||.....|...:       ::...:|.||.|:|.||..||:.|...
  Fly   197 -----SCSPNSSPLKNHSSGGPVEITPLIND-------YADSSKRIRTAFTSTQLLELEREFSHN 249

  Fly   140 HYPDAFVREELATKVHLSEARVQVWFQNRRAK----------FRRNERSVGSRTLLDTAPQL 191
            .|.....|.|:|.::.|||.:|::||||||.|          |..:..|.||......:||:
  Fly   250 AYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESPTFNLSTNSNGSPQASPVSPQV 311

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	26/65 (40%)
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	25/55 (45%)