DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and Dbx2

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_997416.2 Gene:Dbx2 / 223843 MGIID:107445 Length:377 Species:Mus musculus


Alignment Length:196 Identity:58/196 - (29%)
Similarity:80/196 - (40%) Gaps:40/196 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GKMAMELSSNFGPT----------------GAGCGGA-DRPAPCSG------NLPAGGGHHSRKP 117
            |:...|..|.|.|:                .|.|||: .|||..:.      .||......:.|.
Mouse   159 GRAPGERDSAFQPSAPVPSKPFLLSAPPFYSACCGGSCRRPASPTAFSREEHGLPLLTQDSNSKA 223

  Fly   118 RR---NRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERS- 178
            ||   .|..||..|..||||:|::..|.....|.:||..:.|.|::|::||||||.|:|.::.. 
Mouse   224 RRGILRRAVFSEEQRKALEKMFQKQKYISKTDRRKLAVSLGLKESQVKIWFQNRRMKWRNSKEKE 288

  Fly   179 -VGSRTLLDTAPQ-------LVPAPISNNMHKYANMPHPHP--QPPPPPGAYAL---NFGPLELR 230
             :.||.|.:.:.|       .|..|.........:.||..|  :...|..|..|   |.|.||..
Mouse   289 VLSSRCLQEVSLQEDRLARPAVGCPPQCPSIWEVSQPHSSPSWREETPESAERLTQENSGVLEAD 353

  Fly   231 S 231
            |
Mouse   354 S 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 25/58 (43%)
Dbx2NP_997416.2 COG5576 <217..334 CDD:227863 36/116 (31%)
Homeodomain 229..283 CDD:459649 23/53 (43%)

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