DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and unc-42

DIOPT Version :9

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_001263845.1 Gene:unc-42 / 192081 WormBaseID:WBGene00006778 Length:279 Species:Caenorhabditis elegans


Alignment Length:227 Identity:73/227 - (32%)
Similarity:109/227 - (48%) Gaps:40/227 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EDKLEDREESGRNLDKIHRFSVDN-------IMEMKHD-AYSKGKMAMELSSNFGPTGAGCGGAD 97
            ::|::|...|..:....:..|:|.       |.:...| |:.|.|......|.||.:.||.  .:
 Worm    19 QEKVKDLGVSLHDFTAYYPSSLDTVSASLRPISDPSSDGAFKKIKTEGLGGSVFGSSIAGV--TN 81

  Fly    98 RPAP-CSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARV 161
            .||. ||...|.....:||  ||:||||:..||..|:..|:::||||.:||||||....|:|||:
 Worm    82 TPARLCSLERPESERLNSR--RRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARI 144

  Fly   162 QVWFQNRRAKFRRNERSVG-------------SRTLLDTAPQLVPAPISNNMHKYANMPHPHPQP 213
            ||||||||||.|::|:.:.             :.||:...  :.||.::.:...|.:...|.|.|
 Worm   145 QVWFQNRRAKHRKHEKQLNKAINPPHSFLSNPANTLMRQG--MYPAALNRDGFWYQSYQRPMPYP 207

  Fly   214 PPPPGAYALNFGPLELRSCQNYTNCYGGFGSS 245
            ...| :|:           .::||....||.|
 Worm   208 TASP-SYS-----------NSFTNPIANFGHS 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeobox 121..173 CDD:278475 32/51 (63%)
unc-42NP_001263845.1 Homeobox 103..157 CDD:365835 32/53 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 87 1.000 Inparanoid score I3719
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.960

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