DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and Pitx3

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_006526827.1 Gene:Pitx3 / 18742 MGIID:1100498 Length:388 Species:Mus musculus


Alignment Length:158 Identity:58/158 - (36%)
Similarity:77/158 - (48%) Gaps:29/158 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 GCGGADR--PAPCSGNLPAGG---GHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELA 151
            ||.|.:.  ....|.:||.|.   |...:|.||.||.|:|.||..||..|:|..|||...|||:|
Mouse   118 GCKGQEHSDSEKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 182

  Fly   152 TKVHLSEARVQVWFQNRRAKFRRNERSVGSRT-----------LLDTAPQLVPAPISNNMHKYAN 205
            ...:|:||||:|||:|||||:|:.|||..:..           |:....::.|.      :.|.|
Mouse   183 VWTNLTEARVRVWFKNRRAKWRKRERSQQAELCKGGFAAPLGGLVPPYEEVYPG------YSYGN 241

  Fly   206 MPHPHPQPPP------PPGAYALNFGPL 227
            .| |....||      |....::|.|||
Mouse   242 WP-PKALAPPLAAKTFPFAFNSVNVGPL 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 32/55 (58%)
Pitx3XP_006526827.1 Homeodomain 149..205 CDD:459649 32/55 (58%)
PTZ00395 <228..>322 CDD:185594 12/48 (25%)
OAR 344..361 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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