DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and Otx1

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_035153.1 Gene:Otx1 / 18423 MGIID:97450 Length:355 Species:Mus musculus


Alignment Length:243 Identity:65/243 - (26%)
Similarity:100/243 - (41%) Gaps:73/243 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 FGPTGAGCGGADRPAPCSGNLPAGGGHHS--RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVRE 148
            :|..|.|..|     |....|....|:.:  ||.||.||||:.:||..||.:|.:|.|||.|:||
Mouse    10 YGMNGLGLAG-----PAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMRE 69

  Fly   149 ELATKVHLSEARVQVWFQNRRAKFRRNERS-VGSRTL--------------LDTAPQLVPAPISN 198
            |:|.|::|.|:||||||:|||||.|:.::| .|::|.              .:::.|..|..:|:
Mouse    70 EVALKINLPESRVQVWFKNRRAKCRQQQQSGNGTKTRPVKKKSSPVRESSGSESSGQFTPPAVSS 134

  Fly   199 NMHKYANMPHPHPQPP----------PPPGAYALN-------FGPLEL----------------- 229
            :....::.......|.          |...|.:|:       :.|..:                 
Mouse   135 SASSSSSASSASANPAAAAAAGLGGNPVAAASSLSTPTASSIWSPASISPGSAPTSVSVPEPLAA 199

  Fly   230 ---RSCQNYTNCYG----------GFGSSGASGSGV----CSFFGATN 260
               .||...:...|          .:|..|:.|.|.    .|:||..:
Mouse   200 PSNASCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPAPSSSYFGGVD 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 34/55 (62%)
Otx1NP_035153.1 Homeodomain 39..95 CDD:459649 34/55 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..144 9/52 (17%)
TF_Otx 178..274 CDD:427350 11/70 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..306
Blue background indicates that the domain is not in the aligned region.

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