DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and Sebox

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_032785.1 Gene:Sebox / 18292 MGIID:108012 Length:190 Species:Mus musculus


Alignment Length:171 Identity:63/171 - (36%)
Similarity:78/171 - (45%) Gaps:37/171 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 PAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQV 163
            |...|....:|.|.|    ||.|||||..||..||:||....|||...||.||...||.||::||
Mouse     4 PVEASPGCASGLGPH----RRKRTTFSVGQLVELERVFAARPYPDISTREHLAQVTHLPEAKIQV 64

  Fly   164 WFQNRRAKFRRNERSVGSRTLLDTAPQLVPAPISNNMHKYANMPHPHPQPPPPPGAYALNFGPLE 228
            |||||||| |..:|..|:   |::..:|.|...|        :|.. ||.|..||..:....|..
Mouse    65 WFQNRRAK-RIKDRKPGA---LNSRLELPPNSCS--------LPDT-PQLPWDPGTSSHPLHPTS 116

  Fly   229 ----LRSCQNYTNCYG----------------GFGSSGASG 249
                ..:|...|:|.|                .:|:|||||
Mouse   117 SAQYTSACPPQTSCLGPILGPGQSWSGAKVAAPWGTSGASG 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 34/55 (62%)
SeboxNP_032785.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 5/19 (26%)
Homeodomain 19..72 CDD:459649 32/52 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..123 13/58 (22%)

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