DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and ttx-1

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_001024212.1 Gene:ttx-1 / 180313 WormBaseID:WBGene00006652 Length:391 Species:Caenorhabditis elegans


Alignment Length:331 Identity:82/331 - (24%)
Similarity:118/331 - (35%) Gaps:80/331 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 NPGNFYYGPTVSG----EIYSSHQSHNLESEDKLEDREE-------------------------- 49
            |.|||...|:::|    :...|..|.|..|.|:.:.:..                          
 Worm    39 NSGNFIPTPSLTGTGASQSSGSASSGNFVSPDETDTKPSPSLMDHNDPTSSLSQQLAQGATLTSP 103

  Fly    50 -SGRNLDKIHRF-------------SVDNIMEMKHDAYSKGKMAMELSSNFGPTGAGCGG----- 95
             |...:|....:             |...:......||...|.|...|....|:..|...     
 Worm   104 YSTTTVDPSSLYFQLSPMSYIPNVSSATTVAAANMSAYFNQKSAYPTSHLGFPSNVGSHSFLQSN 168

  Fly    96 -------ADRPAPCSGNLP--AGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELA 151
                   :|.|....|::.  |.....|||.||.||||:..||..||..|.:|.|||.|:||::|
 Worm   169 MYIPSSLSDCPTATMGSMSWNANQPGFSRKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMA 233

  Fly   152 TKVHLSEARVQVWFQNRRAKFRRNERSVGSRTLLDTAPQLVPAPISNNMHKYA-----NMPHPHP 211
            .|:.|.|:||||||:|||||.|:.::::        ||.......|.|.....     .......
 Worm   234 HKIQLPESRVQVWFKNRRAKARQQKKTL--------APSNSGVTCSGNNGSTGGGSSNGSTGSEV 290

  Fly   212 QPPPPPGAYA-LNFGPLELRSCQNYTNCYGGFGSSG--------ASGSGVCSFFGATNYCVAANY 267
            ||..|....: |.|..:....|...:.........|        :|.||..|:.|.:::...|.|
 Worm   291 QPSSPATTDSELKFSEVIKEECDEQSISPSADDQKGVNSYINPISSSSGTTSYNGTSSFRPQAQY 355

  Fly   268 AKNAYP 273
            ...:||
 Worm   356 PYASYP 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 33/55 (60%)
ttx-1NP_001024212.1 Homeodomain 200..256 CDD:459649 33/55 (60%)

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