DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and ceh-19

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_001023142.1 Gene:ceh-19 / 177590 WormBaseID:WBGene00000442 Length:199 Species:Caenorhabditis elegans


Alignment Length:231 Identity:51/231 - (22%)
Similarity:83/231 - (35%) Gaps:77/231 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PTVSGEIYSSHQSHNLESEDKLEDREESGRNL---------DKIHRFSVDN------IMEM---- 68
            |...|..:..........|   ||.||..:|:         .::..|::.|      ::|:    
 Worm    15 PVEEGNDFEEENDSEKNGE---EDEEEEEKNVIDGWTNMATSQLAMFAIANDLRTPTLVELQMLL 76

  Fly    69 -----KHDAYSKGKMAMELSSNFGPTGAGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQ 128
                 ||| |.:                     .|.:.|           .||||:   .:|:.|
 Worm    77 GVSARKHD-YKR---------------------SRKSVC-----------ERKPRQ---AYSARQ 105

  Fly   129 LTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERSVGSRTLLDTAP--QL 191
            |..||..|:...|.....|.:|:..::|:|.:::.||||||.|:::...| ..|.::..||  ..
 Worm   106 LDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQNRRTKWKKQLTS-SIRQMVKDAPTSTS 169

  Fly   192 VPAPISNNMHKYANMPHPHPQPPPPPGAYALNFGPL 227
            |..|..:.:           .||.||...|.:...|
 Worm   170 VGVPFQSLL-----------TPPTPPTTLACHVNSL 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 19/55 (35%)
ceh-19NP_001023142.1 Homeodomain 95..151 CDD:459649 22/58 (38%)

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