DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and ceh-45

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_490823.1 Gene:ceh-45 / 171689 WormBaseID:WBGene00022837 Length:229 Species:Caenorhabditis elegans


Alignment Length:149 Identity:53/149 - (35%)
Similarity:67/149 - (44%) Gaps:36/149 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 FSVDNIME-------MKHDAYSKGKMAMELSSNFGPTGAGCGGADRP------------APCSGN 105
            ||:|.::.       ..|:          ....||..||....:..|            ..|...
 Worm    37 FSIDTLLSNPLAGIPQLHN----------FQDPFGAVGAAAAASALPWQFHPANYPFFSMLCGPL 91

  Fly   106 LP--AGGGHH----SRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVW 164
            :|  ....||    ||:.||:||.||..||..||..|..||||||..|||||.:..|.|.||:||
 Worm    92 MPPFMAPYHHQHYASRRKRRHRTIFSEEQLNILETTFSTTHYPDATTREELAVQCSLKEERVEVW 156

  Fly   165 FQNRRAKFRRNERSVGSRT 183
            |:|||||.|:.::. .|||
 Worm   157 FKNRRAKERKQKKD-DSRT 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 34/55 (62%)
ceh-45NP_490823.1 Homeodomain 110..166 CDD:459649 34/55 (62%)

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