Protein Alignment CG9876 and Hoxd4

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_034599.2
• Gene: Hoxd4 / 15436
• MGIID: 96208
• Length: 250
• Species: Mus musculus
• Alignment Length: 163
• Identity: 42/163 - (25%)
• Similarity: 65/163 - (39%)
• Gaps: 50/163 - (30%)

  Fly    84 SNFGPTGAGCGGADRPAPCSG----NLPAG---------------------------------GG 111
            |::|..|..| .|..|||..|    :.|.|                                 ||
Mouse    87 SHYGAPGERC-PAPPPAPLPGARACSQPTGPKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGG 150

  Fly   112 HHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNE 176
                :|:|:||.::..|:..|||.|....|.....|.|:|..:.|||.::::||||||.|::::.
Mouse   151 ----EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 211

  Fly   177 R--------SVGSRTLLDTAPQLVPAPISNNMH 201
            :        |..|......||.....|::.:.|
Mouse   212 KLPNTKGRSSSSSSCSSSAAPGQHLQPMAKDHH 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	22/55 (40%)
Hoxd4	NP_034599.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	31..126		11/39 (28%)
		Antp-type hexapeptide	131..136		0/4 (0%)
		Homeodomain	153..209	CDD:459649	22/55 (40%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	210..250		6/35 (17%)