DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and Hoxb6

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_006532355.1 Gene:Hoxb6 / 15414 MGIID:96187 Length:309 Species:Mus musculus


Alignment Length:112 Identity:31/112 - (27%)
Similarity:49/112 - (43%) Gaps:27/112 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 SSNFGPTGAGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVR 147
            ||:|||:|                           ||.|.|::..|...|||.|....|.....|
Mouse   224 SSSFGPSG---------------------------RRGRQTYTRYQTLELEKEFHYNRYLTRRRR 261

  Fly   148 EELATKVHLSEARVQVWFQNRRAKFRRNERSVGSRTLLDTAPQLVPA 194
            .|:|..:.|:|.::::||||||.|:::..:.:.:..|.....:..||
Mouse   262 IEIAHALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAEEEEEKPA 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 22/55 (40%)
Hoxb6XP_006532355.1 Homeodomain 232..288 CDD:459649 22/55 (40%)

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