DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9876 and Hoxb5

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_032294.2 Gene:Hoxb5 / 15413 MGIID:96186 Length:269 Species:Mus musculus


Alignment Length:191 Identity:46/191 - (24%)
Similarity:79/191 - (41%) Gaps:38/191 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YQQQLHSLPVGNPGNFYYGPTVSGEIYSSHQSHNLESEDKLEDREESGRNLDKIHRFSVDNIMEM 68
            ::|...|..:.:|.:.   |..:|:.:.:..|.:..|:....  ..|..|..:|...|..:..| 
Mouse    85 FRQATSSCSLSSPESL---PCTNGDSHGAKPSASSPSDQATP--ASSSANFTEIDEASASSEPE- 143

  Fly    69 KHDAYSKGKMAMELSSNFGPTGAGCGGADRPAPCSGNLPAGGG---------------HHSRKP- 117
                    :.|.:|||   |:.|..    :|.|.:.:..|..|               |....| 
Mouse   144 --------EAASQLSS---PSLARA----QPEPMATSTAAPEGQTPQIFPWMRKLHISHDMTGPD 193

  Fly   118 -RRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNER 177
             :|.||.::..|...|||.|....|.....|.|:|..:.|||.::::||||||.|::::.:
Mouse   194 GKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 22/55 (40%)
Hoxb5NP_032294.2 PRK07003 <67..>171 CDD:235906 21/106 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..173 22/108 (20%)
Antp-type hexapeptide 176..181 0/4 (0%)
Homeodomain 195..251 CDD:459649 22/55 (40%)

Return to query results.
Submit another query.