Protein Alignment CG9876 and Crx

DIOPT Version :10

• Sequence 1: NP_611756.1
• Gene: CG9876 / 37668
• FlyBaseID: FBgn0034821
• Length: 275
• Species: Drosophila melanogaster
• Sequence 2: NP_001106801.1
• Gene: Crx / 12951
• MGIID: 1194883
• Length: 323
• Species: Mus musculus
• Alignment Length: 191
• Identity: 54/191 - (28%)
• Similarity: 80/191 - (41%)
• Gaps: 61/191 - (31%)

  Fly   115 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFR------ 173
            ||.||.||||:.:||..||.:|.:|.|||.:.|||:|.|::|.|:||||||:|||||.|
Mouse    61 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQRQQQ 125

  Fly   174 -RNERSVGSRT-------------------------LLDTAPQLVPAPISNNMHKYANM------ 206
             :.::..|::|                         :.|:....:|.|..:.....|.:
Mouse   126 KQQQQPPGAQTKARPAKRKAGTSPRPSTDVCTDPLGISDSYSPSLPGPSGSPTTAVATVSIWSPA 190

  Fly   207 ---PHPHPQ--------PPPPPGAYALNFGPLELRSCQNYTNCYGGFGSSGASGSGVCSFF 256
               |.|..|        |......||:.:.|.            ..|.||.::.:...|:|
Mouse   191 SEAPLPEAQRAGLVASGPSLTSAPYAMTYAPA------------SAFCSSPSAYASPSSYF 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9876	NP_611756.1	Homeodomain	118..174	CDD:459649	34/62 (55%)
Crx	NP_001106801.1	Homeodomain	64..117	CDD:459649	31/52 (60%)
		TF_Otx	188..273	CDD:427350	12/64 (19%)