DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and uncx

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_001305673.1 Gene:uncx / 100492016 XenbaseID:XB-GENE-920201 Length:483 Species:Xenopus tropicalis


Alignment Length:91 Identity:42/91 - (46%)
Similarity:55/91 - (60%) Gaps:0/91 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 PTGAGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELAT 152
            |:|.|..|..:....|.::.........|.||.||.|:..||..|||.|..:||||.|:||.||.
 Frog    72 PSGCGLNGDSQQYKLSDSIDPDKESPGCKRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALAL 136

  Fly   153 KVHLSEARVQVWFQNRRAKFRRNERS 178
            ::.|.|:||||||||||||:|:.|.:
 Frog   137 RLDLVESRVQVWFQNRRAKWRKKENT 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 34/55 (62%)
uncxNP_001305673.1 homeobox domain 101..160 35/58 (60%)
Homeodomain 102..158 CDD:459649 34/55 (62%)

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