DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9876 and emx1l

DIOPT Version :10

Sequence 1:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_002936883.1 Gene:emx1l / 100101663 XenbaseID:XB-GENE-876649 Length:213 Species:Xenopus tropicalis


Alignment Length:66 Identity:33/66 - (50%)
Similarity:44/66 - (66%) Gaps:0/66 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 GHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 175
            |..||||:|.||.||.:||..||..||:.||.....|::||..:.|:|.:|:|||||||.|.:|.
 Frog   109 GPFSRKPKRIRTAFSPSQLLRLEGAFEKNHYVVGAERKQLANSLCLTETQVKVWFQNRRTKHKRQ 173

  Fly   176 E 176
            :
 Frog   174 K 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 27/55 (49%)
emx1lXP_002936883.1 Homeodomain 116..172 CDD:459649 27/55 (49%)

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