DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Art7 and Carm1

DIOPT Version :9

Sequence 1:NP_611753.4 Gene:Art7 / 37664 FlyBaseID:FBgn0034817 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_001025212.1 Gene:Carm1 / 363026 RGDID:1305879 Length:608 Species:Rattus norvegicus


Alignment Length:479 Identity:107/479 - (22%)
Similarity:172/479 - (35%) Gaps:119/479 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SCFSHVMNPITGQNSWQERGDD---------YDYHLEVANAGFGDMLHDWERNQKYFAALRKTIA 57
            :|..|.:.    ::.:.||.::         |.|..:..|     |:.|:.|...|..|:.:...
  Rat   127 TCRGHTLE----RSVFSERTEESSAVQYFQFYGYLSQQQN-----MMQDYVRTGTYQRAILQNHT 182

  Fly    58 GMREAGREVHVLDIGTGTGILSMMALAAGADSVTACEAFLPMANCAEKILAANGAGDKVRLIRKR 122
            ..::.    .|||:|.|:||||..|..|||..:.|.|| ..||..||.::.:|...|::.:|..:
  Rat   183 DFKDK----IVLDVGCGSGILSFFAAQAGARKIYAVEA-STMAQHAEVLVKSNNLTDRIVVIPGK 242

  Fly   123 STEIQVGEDMPRKANLLVAELLDTELIGEGAIGIYNHAHAELLTEDALCIPARARCYAQVAQSPL 187
            ..|:    .:|.:.:::::|.:...|..|..:..|.|                       |:..|
  Rat   243 VEEV----SLPEQVDIIISEPMGYMLFNERMLESYLH-----------------------AKKYL 280

  Fly   188 AAQWNSLKTIANLDGEPLLHPPEQLKSCQ-------GEAALHDVQLSQLPSSA----FR-PLTDP 240
            ....|...||.::...|.  ..|||...|       .:.:.|.|.||.|..:|    || |:.|.
  Rat   281 KPSGNMFPTIGDVHLAPF--TDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDT 343

  Fly   241 VEI---------FQFDFQRKQEREKQRSQL-LKLQSKQPGAAELVFYWWDIQLDDDGEIL---LS 292
            .:|         :..:|...:|.:..|.:: .|......|....:.:|:|:..  .|.|:   ||
  Rat   344 FDIRILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAF--IGSIMTVWLS 406

  Fly   293 CAPYWAHPQLKELAAEKAKDHPLPNVVPWRDHWMQAIYYIPKPLQLLEAGKSFHLSC-----HHD 352
            .||                ..||       .||.|.......|| ..:||.:...:|     ...
  Rat   407 TAP----------------TEPL-------THWYQVRCLFQSPL-FAKAGDTLSGTCLLIANKRQ 447

  Fly   353 EYSLWFDAR-EEAPTKSVRRHTCTCDLHMTYSRSRIGQLNQSPRNKRYLRYLEE-----SIEAEK 411
            .|.:...|: ::..:||    :...||...:.| ..|.....|....|....|.     |.....
  Rat   448 SYDISIVAQVDQTGSKS----SNLLDLKNPFFR-YTGTTPSPPPGSHYTSPSENMWNTGSTYNLS 507

  Fly   412 SNVLVLGNGCLLGLASSALGAASV 435
            |.|.|.|......|:|...|.:||
  Rat   508 SGVAVAGMPTAYDLSSVIAGGSSV 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art7NP_611753.4 AdoMet_MTases 36..>186 CDD:302624 36/149 (24%)
Carm1NP_001025212.1 CARM1 35..139 CDD:402914 2/15 (13%)
AdoMet_MTases 189..284 CDD:100107 32/122 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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