DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp2 and CG4830

DIOPT Version :9

Sequence 1:NP_995925.2 Gene:Fatp2 / 37657 FlyBaseID:FBgn0265187 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster


Alignment Length:590 Identity:135/590 - (22%)
Similarity:218/590 - (36%) Gaps:155/590 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 NIGDIFESNVARQPDKLAIVSESQ--QWTFRQVNEHSNRVANVFHSHGYKKGDVVGLLLENRAEF 202
            ::|.|...|:...|..:..:|:|:  :.||.|....:.|:|....|.|....|::|:...|....
  Fly    29 SLGRIIFKNMRNWPKNVCQISDSEGVEVTFGQALTWAIRIAQQLKSRGLDHKDIIGISARNTTYI 93

  Fly   203 VATWLGLSKIGVITPLINTN--LRGASLQHSITVGQCTALIYGASFRSAVMDIAKDLPAHVGLYQ 265
            :.|.:.....|  ||..:.|  |..::|:|          :|..|....:.   .|...:..||.
  Fly    94 MPTAVACFFHG--TPFQSANPILEESTLKH----------LYNISKPKIIF---TDADHYDKLYS 143

  Fly   266 FNDESNQEVVASEGLSQGLAQQLNGLLETAAK-----DKVAAGASRADHHDKLVYIYTSGTTGLP 325
            .......|::.:.|...|:....:.|..|..:     ..:..|.|:.     :..:.:|||||:|
  Fly   144 ATSAFKPEIILTTGTKDGVLSIQDLLAPTKTEFFYQPTPLKEGPSQT-----VAILTSSGTTGMP 203

  Fly   326 KAA-----VITHSRYF-------FIAAGIHYTLGFKDQDVFYTPLPLYHTAGGVMSMGQALLFGS 378
            ||.     ::|....|       ||:|.:.:..|     ::.|   ::.|..|.          :
  Fly   204 KAVCISNDILTQETVFVNGYDTIFISASLDWITG-----LWAT---IFSTVNGC----------T 250

  Fly   379 TVVIRKKFSASGYFSDCARFQCTVGQYIGEMARYILATPSA-PHDRNHQVRMVFGNGLRPQIWPQ 442
            .::..|.|:|..:....:::..|......|....:|..|:| |.......::.||.|...|...:
  Fly   251 RIISSKPFAADYFVYLVSKYSITYALIPPEHCCSLLDCPTATPEKLGSLTKLNFGGGRMTQATVE 315

  Fly   443 FVERFGIRKV-GEFYGATEGNANIMNNDSTVGAIGFISRILPQIYPISIIKADPHTGEPLRNSQG 506
            .|::.....| ...||.||              :|||      ::....:|... .|.||     
  Fly   316 RVKKLAPNGVLNSSYGMTE--------------VGFI------VFNHGHLKLTA-AGNPL----- 354

  Fly   507 LCERCEADEPGVFVGKIV--RGNPCREFLGYVDQKASSKKVVHDVFS-KGDMA------------ 556
                     ||:.| |||  .||.    || |:|  :.:.:||:.|| .|..|            
  Fly   355 ---------PGIQV-KIVDDDGNQ----LG-VNQ--TGEIIVHNGFSWNGYFADPEATKAMQDEE 402

  Fly   557 --FISGDLLVADERGYLYFKDRTGDTFRWKGENVSTSEVEAQLSNLAGYKDVIVYGVSIPNTEGR 619
              |.:||:...||..|||..||..:..:|||..:..:||||.:..|...|.|.|.|| ...|:|.
  Fly   403 GWFHTGDMGYFDEDDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDELPEVKRVCVIGV-YDETQGD 466

  Fly   620 AGMAAIYDPTREVNVS---------------------QLGVELAKSLP---------NYARPQFL 654
            ...|.:   .||.|.:                     :.||:.|..:|         .|||..|:
  Fly   467 VPGALV---VREDNATLTAQQVIDHVAKRLPDIQKQLRAGVQFADEIPQNHNGKVVRRYARDLFV 528

  Fly   655 RFLRK 659
            ...:|
  Fly   529 ALSKK 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp2NP_995925.2 PRK08279 115..714 CDD:236217 135/590 (23%)
AFD_class_I 163..680 CDD:302604 129/567 (23%)
CG4830NP_650160.1 CaiC 18..529 CDD:223395 134/584 (23%)
AFD_class_I 46..518 CDD:302604 126/556 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452175
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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