DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp2 and CG5568

DIOPT Version :9

Sequence 1:NP_995925.2 Gene:Fatp2 / 37657 FlyBaseID:FBgn0265187 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster


Alignment Length:568 Identity:123/568 - (21%)
Similarity:207/568 - (36%) Gaps:157/568 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 NLNIGDIFESNVARQPDKLAIVS--ESQQWTFRQVNEHSNRVANVFHSHGYKKGDVVGLLLENRA 200
            :|:||:|....:.|.....|.:|  |:.:.|::.:..::.:||:.....|.::||.||:      
  Fly    36 DLSIGEIIFQQMERNAMLTAQISVTENTELTWKDIQTNAMKVASYMRKLGLEQGDFVGV------ 94

  Fly   201 EFVATWLGLSKIGVITPLINTNLRGASLQHSITVGQCTALIYGASFRSAVMDIAKDLPAHVGLYQ 265
                       ||.:|    |:|              |||.|...|...        |.|....:
  Fly    95 -----------IGRLT----THL--------------TALAYACFFNGT--------PYHALHTE 122

  Fly   266 F--------------------NDESNQEVVASEGLSQGLAQQLN---GLLE-----TAAKDKVAA 302
            :                    .||..:...|::||...:....|   |:|.     |...:....
  Fly   123 YEQSAIERLFGITKPRLIFCDGDEFEKVQAATKGLQVQIVTMRNHPAGILRIQDILTTPVEMNFR 187

  Fly   303 GASRADHHDKLVYIY-TSGTTGLPKAAVITHSRYFFIAAGIHYTLG-FKDQD---VFYTPLPLYH 362
            .....|..|:|:.|. :|||:|||||..|::|         |..:| |...|   :.|.|..|..
  Fly   188 PVRLKDGTDQLLAILSSSGTSGLPKAVTISNS---------HQIIGSFLPVDSSIIQYNPNTLDW 243

  Fly   363 TAGGVMSMGQALLFGSTVVIRKKFSASGYFSDCARFQCTVGQYIGEMARYILATPSAPHDRNHQV 427
            .:|..|::..|:           ||.:....||   ........|.:.:|             ::
  Fly   244 ASGITMTINAAV-----------FSLTSIIEDC---DFDPANLCGLIEKY-------------RI 281

  Fly   428 RMVFGNGLRPQI---WPQF-------VERFGIRKVGEFYGATEGNANIMN-------NDSTVGAI 475
            .|||.:..:..:   .|:|       |:.|       |||.:..:..:.|       |:....:.
  Fly   282 SMVFVSSSQLAMLSNCPEFYAADLSSVKYF-------FYGGSNCSLEVQNKIRSRLSNECVNFSY 339

  Fly   476 GFISRILPQIYPISIIKADPHTGEPLRNSQ--GLCERCEADEPGVFVGKIVRGNPCREFLGYVDQ 538
            .......|.....:..:.....|.|:|..|  .:.|..||..|.| ||:|...|. :::.||...
  Fly   340 TLTELNSPGCLNFNFDEKPNSVGRPVRGIQIKIVNELGEAQGPNV-VGEICFNNG-QKWPGYYKN 402

  Fly   539 KASSKKVVHDVFSKGDMAFISGDLLVADERGYLYFKDRTGDTFRWKGENVSTSEVEAQLSNLAGY 603
            ...:||:     ...:..|.:|||...||.|||:..||..|..:::......||:|:.::.:...
  Fly   403 PEETKKM-----QDSENWFHTGDLGYMDEDGYLFIIDRLKDMLKYQTIMYYPSEIESVIAEMPNV 462

  Fly   604 KDVIVYGVSIPNTEGRAGMAAIYDPTREVNVSQLGVEL-AKSLPNYAR 650
            .:..|:|:..| ..|....|::        |.:.|.:| |:.:..|.|
  Fly   463 VEACVFGIWDP-VYGDKAAASV--------VKKQGTQLEAQDVVEYVR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp2NP_995925.2 PRK08279 115..714 CDD:236217 123/568 (22%)
AFD_class_I 163..680 CDD:302604 115/541 (21%)
CG5568NP_647992.1 CaiC 35..540 CDD:223395 123/568 (22%)
Firefly_Luc_like 55..530 CDD:213279 118/549 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452173
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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