DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp2 and hll

DIOPT Version :10

Sequence 1:NP_995925.2 Gene:Fatp2 / 37657 FlyBaseID:FBgn0265187 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster


Alignment Length:603 Identity:124/603 - (20%)
Similarity:215/603 - (35%) Gaps:133/603 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 IGDIFESNVARQPDKLAIV-----SESQQWTFRQVNEHSNRV---ANVFHSHGYKKGDVVGLLLE 197
            |.:.|:.:..:..|..|:|     |.:..||.....|:..||   |.:..|.|.::...||:|..
  Fly    38 IPEFFKESCEKYSDLPALVWETPGSGNDGWTTLTFGEYQERVEQAALMLLSVGVEERSSVGILAF 102

  Fly   198 NRAEFVATWLGLSKIGVITPLINTNLRGASLQHSITVGQCTALIYGASFRSAVMDIAKD-LPAHV 261
            |..|:.....|..:.|.:...:..:....::.|.:..|:.:..:...:.:.|.:...|: ||...
  Fly   103 NCPEWFFAEFGALRAGAVVAGVYPSNSAEAVHHVLATGESSVCVVDDAQQMAKLRAIKERLPRLK 167

  Fly   262 GLYQFNDESNQEVVASEGLS--QGLAQQLNGLLETAAKDKVAAGASRADHHDKLVYIYTSGTTGL 324
            .:.|.:......|....|..  |.|.:|   ...:..|:::.|..||...::..:.|:||||.|:
  Fly   168 AVIQLHGPFEAFVDHEPGYFSWQKLQEQ---TFSSELKEELLARESRIRANECAMLIFTSGTVGM 229

  Fly   325 PKAAVITHSRYFF--IAAGIHYTLGFKDQDV------FYTPLPLYHTAGGVMSMGQALLFGSTVV 381
            |||.:::|....|  .:|..|.      ||:      |.:.|||.|.|..:..:...|.....|.
  Fly   230 PKAVMLSHDNLVFDTKSAAAHM------QDIQVGKESFVSYLPLSHVAAQIFDVFLGLSHAGCVT 288

  Fly   382 IRKKFSASGYFSDCARFQCTVGQYIGE-------MARYILATPSA-PHDR-----------NHQV 427
            ...|.:..|......| :....:..|.       ..|.:.|...| |:.|           .||.
  Fly   289 FADKDALKGTLIKTFR-KARPTKMFGVPRVFEKLQERLVAAEAKARPYSRLLLARARAAVAEHQT 352

  Fly   428 RM-------VFGNG---LRPQIWPQFVERFGIRK-------------------------VGEFYG 457
            .:       ::||.   |..::.....|..|:..                         :||.||
  Fly   353 TLMAGKSPSIYGNAKYWLACRVVKPIREMIGVDNCRVFFTGGAPTSEELKQFFLGLDIALGECYG 417

  Fly   458 ATEGNANIMNNDSTVGAIGF---ISRILPQIYPISIIKADPHTGEPLRNSQGLCERCEADEPGVF 519
            .:|          |.|||..   ||.:.........:....|  ||..|.||..         :.
  Fly   418 MSE----------TSGAITLNVDISNLYSAGQACEGVTLKIH--EPDCNGQGEI---------LM 461

  Fly   520 VGKIVRGNPCREFLGYVDQKASSKKVVHDVFSKGDMAFISGDLLVADERGYLYFKDRTGD-TFRW 583
            .|::|       |:||:.....:::.|     |.|....||||...|.:|.|....|..: ....
  Fly   462 RGRLV-------FMGYLGLPDKTEETV-----KEDGWLHSGDLGYIDPKGNLIISGRLKELIITA 514

  Fly   584 KGENVSTSEVEAQL-SNLAGYKDVIVYGVSIPNTEGRAGMAAIYDPTREVNVSQLGVELAKSLPN 647
            .|||:....:|..: ..|....:|::.|      :.|..:..:.....:.: ::.|:.|     :
  Fly   515 GGENIPPVHIEELIKKELPCVSNVLLIG------DHRKYLTVLLSLKTKCD-AKTGIPL-----D 567

  Fly   648 YARPQFLRFLRKIDLTGT 665
            ..|.:.:.:||.:|:..|
  Fly   568 ALREETIEWLRDLDIHET 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp2NP_995925.2 Adenylate forming domain, Class I superfamily 163..680 CDD:473059 118/576 (20%)
hllNP_609696.1 Adenylate forming domain, Class I superfamily 62..680 CDD:473059 119/579 (21%)

Return to query results.
Submit another query.