DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp2 and pdgy

DIOPT Version :9

Sequence 1:NP_995925.2 Gene:Fatp2 / 37657 FlyBaseID:FBgn0265187 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster


Alignment Length:622 Identity:133/622 - (21%)
Similarity:238/622 - (38%) Gaps:154/622 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 VTTPRDTVALFAYIRVLLFIKRQERKNLNIGDIFESNVARQPDKLAIVSESQQWTFRQVNEHSN- 175
            ||.|  .|.|..|  |....|:.||:...:                .|...:|:||.|:.:.|. 
  Fly    70 VTIP--NVPLHEY--VWRDFKKWERRTAAV----------------CVITDRQYTFAQMRDASAA 114

  Fly   176 ---RVANVFHSHGYKKGDVVGLLLENRAEFVATWLGLSKIGVITPLIN-----------TNLRGA 226
               |:...|:   .:|.||:.:.|.|..|:....||..:.|:....:|           ....||
  Fly   115 FAVRLQTKFN---LQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGA 176

  Fly   227 -----SLQHSITVGQCTALIYGASFRSAVMDIAKDLPAHVGLYQFNDESNQEVVASEGLSQGLAQ 286
                 ::....|:.|.:.|: |.....||:..:.:.....|...|::.::.:.|..|.|.     
  Fly   177 KFLVGTVSGFATLSQASKLV-GRQIPIAVVRTSAEEALPEGAIDFSELTSTQNVRYEDLK----- 235

  Fly   287 QLNGLLETAAKDKVAAGASRADHHDKLVYI-YTSGTTGLPKAAVITHSRYFFIAAGIHYTLGFK- 349
                    |.|:..|         |.:|:: ::||||||||..:::|:........:..:|... 
  Fly   236 --------APKEASA---------DDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQASLPLDL 283

  Fly   350 --DQDVFYTPLPLYHTAGGVMSMGQALLFGSTVVIRKK------------FSASGYFSDCARFQC 400
              .|:.....||.:|            ::|.|||:..|            |....:.....::|.
  Fly   284 MGPQNTLPGVLPFFH------------IYGLTVVMLSKLGQGCRLATMPCFKPDDFMRSLDKYQG 336

  Fly   401 TVGQYIGEMARYILATP-----SAPHDRNHQVRMVFGNGLRPQIWPQFVERF------GIRKVGE 454
            ::...:..:|.:::..|     :|||     :::|. :|..| |....||||      .:.|.| 
  Fly   337 SILNLVPPIALFMINHPKLTQETAPH-----LKVVM-SGAAP-IGQHDVERFLNKFPNTVFKQG- 393

  Fly   455 FYGATEGNANIM---NNDSTVGAIGFISRILPQIYPISIIKADPHTGEPLRNSQGLCERCEADEP 516
             ||.||.:..::   ..:....:.|    :||......|:        ||..|         |..
  Fly   394 -YGMTEASPVVLLTPEGNKVYASTG----VLPASTEAKIV--------PLDGS---------DAK 436

  Fly   517 GVFVGKIVRGNPC----REFLGYVDQKASSKKVVHDVFSKGDMAFISGDLLVADERGYLYFKDRT 577
            |  ||....|..|    :...||::...:::.    .|..|:. ..|||:...||.|..|..||.
  Fly   437 G--VGPRTTGELCVRGPQVMAGYLNNDEANQV----TFYPGNW-LRSGDVAFYDEDGLFYITDRM 494

  Fly   578 GDTFRWKGENVSTSEVEAQLSNLAGYKDVIVYGVSIPNT-EGRAGMA-AIYDPTREVNVSQLGVE 640
            .:..:.||..|..:|:||.|.:.....:..|:|  ||:. .|.|..| .:.....:.:..::...
  Fly   495 KELIKVKGFQVPPAELEAVLRDHPKILEAAVFG--IPHEFNGEAPRAIVVLRQGEKASAEEISAY 557

  Fly   641 LAKSLPNYARPQ-FLRFLRKIDLTGTFKLRKVELQQQ 676
            :|:.:.:|.:.: .:.|:.::....|.|:.:.||:::
  Fly   558 VAERVAHYKKLEGGVIFVDEVPKNPTGKILRRELKEK 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp2NP_995925.2 PRK08279 115..714 CDD:236217 131/619 (21%)
AFD_class_I 163..680 CDD:302604 122/571 (21%)
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 129/613 (21%)
Firefly_Luc_like 99..587 CDD:213279 120/564 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452131
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.