DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp2 and Slc27a6

DIOPT Version :9

Sequence 1:NP_995925.2 Gene:Fatp2 / 37657 FlyBaseID:FBgn0265187 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_001099615.1 Gene:Slc27a6 / 291582 RGDID:1311977 Length:619 Species:Rattus norvegicus


Alignment Length:644 Identity:238/644 - (36%)
Similarity:362/644 - (56%) Gaps:49/644 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 YGVATLYAALISILLVRPGW--RWFYIAAVTTPRDTVALFAY-IRVLLFIKRQERKNLNIGDIFE 146
            :|...|....:..||....|  .||.:          .|..| |::.::..|.|.  :.:.|.|.
  Rat     9 FGAGLLSLHFVQKLLFPYFWDDLWFLL----------KLVRYGIQMEIYKLRGEL--VTVLDKFL 61

  Fly   147 SNVARQPDKLAIVSESQQWTFRQVNEHSNRVANVFHSHG-YKKGDVVGLLLENRAEFVATWLGLS 210
            |:..|||.|..|:.|...:|:..|::.|||||:...:|. .|:||||.||:.|..:||..|.||:
  Rat    62 SHARRQPKKAFIIYEGDVYTYEDVDKRSNRVAHALLNHSDLKRGDVVALLMSNEPDFVHVWFGLA 126

  Fly   211 KIGVITPLINTNLRGASLQHSITVGQCTALIYGASFRSAVMDIAKDLPAHVGLYQFNDESNQEVV 275
            |:|.:...:|:|||..||.|.|...:..|::.|.....::.:|...||.|:.::...|...:.:|
  Rat   127 KLGCVVAFLNSNLRFESLLHCIRTSEPKAMVVGEDLLGSLEEILPSLPKHIRVWGMKDSVPEGIV 191

  Fly   276 ASEGLSQGLAQQLNGLLETAAKDKVAAGASRADHH------DKLVYIYTSGTTGLPKAAVITHSR 334
            :           |...|..|:.:.|.     ..||      ...:||:|||||||||||||:..:
  Rat   192 S-----------LKEKLSLASDEPVP-----PSHHVTSSLKSTCLYIFTSGTTGLPKAAVISQFQ 240

  Fly   335 YFFIAAGIHYTLGFKDQDVFYTPLPLYHTAGGVMSMGQALLFGSTVVIRKKFSASGYFSDCARFQ 399
            ....:.|: :..|....|:.|..|||||::|.::.:|..:..|:|.|::||||||.:::||.::.
  Rat   241 VLKGSFGL-WAFGCTADDIVYITLPLYHSSGALLGIGGCVELGATCVLKKKFSASQFWNDCRKYN 304

  Fly   400 CTVGQYIGEMARYILATPSAPHDRNHQVRMVFGNGLRPQIWPQFVERFGIRKVGEFYGATEGNAN 464
            .||.|||||:.||:...|....:::|:||:..|||:...:|.||::|||..|:.|||||||||..
  Rat   305 VTVFQYIGELCRYLCKQPQREGEKDHRVRLAVGNGMSSDVWRQFLDRFGNIKMCEFYGATEGNIC 369

  Fly   465 IMNNDSTVGAIGFISRILPQIYPISIIKADPHTGEPLRNSQGLCERCEADEPGVFVGKIVRGNPC 529
            .||:...:|::|.::.....::...:||.|....|||||.||.|......|||:.|.::.:.|| 
  Rat   370 FMNHTGKIGSVGRVNFFYNLLFSFELIKYDFQKDEPLRNEQGWCYCVRKGEPGLLVSRVNKKNP- 433

  Fly   530 REFLGYV-DQKASSKKVVHDVFSKGDMAFISGDLLVADERGYLYFKDRTGDTFRWKGENVSTSEV 593
              |.||. ..|.:..|::.|||.|||:.|.:|||:..|...:|||.||.|||||||||||:|:||
  Rat   434 --FFGYTGSYKQTKSKLLFDVFKKGDVYFNTGDLMFQDHENFLYFWDRIGDTFRWKGENVATTEV 496

  Fly   594 EAQLSNLAGYKDVIVYGVSIPNTEGRAGMAA-IYDPTREVNVSQLGVELAKSLPNYARPQFLRFL 657
            ...|..|...::..||||.:|..||:|||.: |..|.:.:::.::..::..|||.||.|:|||..
  Rat   497 ANVLGRLDFIQEANVYGVPVPGYEGKAGMTSIILKPNKSLDLEKMYDQVVTSLPAYACPRFLRIQ 561

  Fly   658 RKIDLTGTFKLRKVELQQQGFNPEIIDDELFYAQPDGV---YAPLTPSVYERIVRNELR 713
            .|::.||||||:|::|.::||||..|.|.|::.  |.:   |.|||..:|.:::..||:
  Rat   562 DKMETTGTFKLKKLQLVEEGFNPLKIADPLYFM--DNLKKSYVPLTQEIYNQVMLEELK 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp2NP_995925.2 PRK08279 115..714 CDD:236217 231/612 (38%)
AFD_class_I 163..680 CDD:302604 204/525 (39%)
Slc27a6NP_001099615.1 PRK08279 58..612 CDD:236217 224/575 (39%)
AFD_class_I 77..609 CDD:302604 214/553 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342901
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000388
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100576
Panther 1 1.100 - - O PTHR43107
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X222
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.840

Return to query results.
Submit another query.