DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp2 and Acsl1

DIOPT Version :9

Sequence 1:NP_995925.2 Gene:Fatp2 / 37657 FlyBaseID:FBgn0265187 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_036952.1 Gene:Acsl1 / 25288 RGDID:2015 Length:699 Species:Rattus norvegicus


Alignment Length:716 Identity:140/716 - (19%)
Similarity:226/716 - (31%) Gaps:279/716 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 NIGDIFESNVARQPDKLAIVSESQQW-TFRQVNEHSNRVANVFHSHGYK--KGDVVGLLLENRAE 201
            |.|....|....||         .:| :::||.|.:..:.:.....|:|  ....:|:..:||.|
  Rat   105 NDGPCLGSRKPNQP---------YEWISYKQVAEMAECIGSALIQKGFKPCSEQFIGIFSQNRPE 160

  Fly   202 FVATWLGLSKIG-VITPLINTNLRGASLQHSITVGQCTALIYGASFRSAVMDIAKDLPAHVGLYQ 265
            :|....|..... |:.||.:| |...::.:.:...:.:.:                         
  Rat   161 WVTIEQGCFTYSMVVVPLYDT-LGTDAITYIVNKAELSVI------------------------- 199

  Fly   266 FNDESNQEVVASEGLSQGLAQQL----------NGLLETAAKDKVAAGASRA------------- 307
            |.|:..:..:..||:...|...|          |.|:|...|..|.....:|             
  Rat   200 FADKPEKAKLLLEGVENKLTPCLKIIVIMDSYDNDLVERGQKCGVEIIGLKALEDLGRVNRTKPK 264

  Fly   308 --DHHDKLVYIYTSGTTGLPKAAVITHSRYF-------------FIAAGIHYTLGFKDQDVFYTP 357
              :..|..:..:||||||.||.|::||....             |||:         .:||..:.
  Rat   265 PPEPEDLAIICFTSGTTGNPKGAMVTHQNIMNDCSGFIKATESAFIAS---------PEDVLISF 320

  Fly   358 LPLYHTAGGVMSMGQALLFGSTVVIRKKFSASGYF--------SDCARFQCTV------------ 402
            |||.|....|:.. ..|..|:.:         |:|        .|....|.|:            
  Rat   321 LPLAHMFETVVEC-VMLCHGAKI---------GFFQGDIRLLMDDLKVLQPTIFPVVPRLLNRMF 375

  Fly   403 ----GQYIGEMARYILATPSAPHD--------RN---------HQVRMVFGNG------------ 434
                ||....:.|::|...|...:        ||         |:::...|..            
  Rat   376 DRIFGQANTSVKRWLLDFASKRKEAELRSGIVRNNSLWDKLIFHKIQSSLGGKVRLMITGAAPVS 440

  Fly   435 ------LRPQIWPQFVERFGIRKVGEFYGATEGNANI---MNNDSTVGAIGFISRILPQIYPISI 490
                  ||..:..||.|.         ||.||..|..   :..|.|.|.:|     .|.  |.:.
  Rat   441 ATVLTFLRAALGCQFYEG---------YGQTECTAGCCLSLPGDWTAGHVG-----APM--PCNY 489

  Fly   491 IKADPHTGEPLRNSQGLCERCEADEPGVFVGKIVRGNPCREFLGYVDQKASSKKVVHDVFSKGDM 555
            ||.........:.::|..|.|            |:|  ...|.||:...|.:.:.:         
  Rat   490 IKLVDVEDMNYQAAKGEGEVC------------VKG--ANVFKGYLKDPARTAEAL--------- 531

  Fly   556 AFISGDLLVADERGYLYFKDRTGDTFRW-------------------KGENVSTSEVEAQLSNLA 601
                      |:.|:|:    |||..:|                   :||.::..::|.......
  Rat   532 ----------DKDGWLH----TGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRSE 582

  Fly   602 GYKDVIVYGVSIPNTEGRAGMAAIYDPTREVNVSQLGVELAKSLPNYARPQ-----FLRFLRKID 661
            ....|.|:|.|:     :|.:.||..|..|:            ||::|:.:     |....|..|
  Rat   583 AVAQVFVHGESL-----QAFLIAIVVPDVEI------------LPSWAQKRGFQGSFEELCRNKD 630

  Fly   662 LTGTFKLRKVEL----------QQQGF--NPEI--IDDELFYAQPDGVYAPLTPSVYERIVRNEL 712
            :........|:|          |.:|.  :||:  ||:.|           |||::  :..|.||
  Rat   631 INKAILEDMVKLGKNAGLKPFEQVKGIAVHPELFSIDNGL-----------LTPTL--KAKRPEL 682

  Fly   713 R 713
            |
  Rat   683 R 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp2NP_995925.2 PRK08279 115..714 CDD:236217 140/716 (20%)
AFD_class_I 163..680 CDD:302604 123/656 (19%)
Acsl1NP_036952.1 LC-FACS_euk 117..695 CDD:341250 137/704 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342895
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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