DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp2 and Acsl6

DIOPT Version :9

Sequence 1:NP_995925.2 Gene:Fatp2 / 37657 FlyBaseID:FBgn0265187 Length:714 Species:Drosophila melanogaster
Sequence 2:XP_006246283.2 Gene:Acsl6 / 117243 RGDID:69403 Length:722 Species:Rattus norvegicus


Alignment Length:679 Identity:134/679 - (19%)
Similarity:231/679 - (34%) Gaps:224/679 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 RQPDKLAIVSESQQW-TFRQVNEHSNRVANVFHSHGYKKG--DVVGLLLENRAEFVATWLGLSKI 212
            |:|:      :..|| ::::|.:.:..:.:....|..|.|  ..:|:..:||.|::...|.....
  Rat   137 RKPE------QPYQWLSYQEVAKRAEFLGSGLLQHDCKVGTEQFIGVFAQNRPEWIIAELACYTY 195

  Fly   213 G-VITPLINTNLRGASLQHSI-TVGQCTALIYGASFRSAVMDIAKDLPAHVGLYQFNDESNQE-- 273
            . |:.||.:| |...|:::.| |...||.::              |.| |..:........:|  
  Rat   196 SMVVVPLYDT-LGPGSIRYIINTADICTVIV--------------DKP-HKAILLLEHVERKETP 244

  Fly   274 ----VVASEGLSQGLAQQ----------LNGLLETAAKDKVAAGASRADHHDKLVYIYTSGTTGL 324
                |:..|.....|.::          :..:.::..::.......|.|  |..:..:||||||.
  Rat   245 GLKLVILMEPFDDALRERGKKCGVDIKSMQAIEDSGQENHRVPVPPRPD--DLSIVCFTSGTTGN 307

  Fly   325 PKAAVITHSRYFFIAAGIHYTLGF----------KDQDVFYTPLPLYHTAGGVMSMGQALLF--G 377
            ||.|::||..   :.|...   ||          :..||..:.|||.|....|:   |::::  |
  Rat   308 PKGAMLTHGN---VVADFS---GFLKVTEKVIFPRQDDVLISFLPLAHMFERVI---QSVVYCHG 363

  Fly   378 STVVIRKKFSASGYFSDCARFQCTVGQYIGEMARYILAT--PSAPHDRNHQVRMVF---GNGLRP 437
            ..|         |:|....|.       :.:..:.:..|  |..|...|.....:|   ...|:.
  Rat   364 GRV---------GFFQGDIRL-------LSDDMKALRPTIFPVVPRLLNRMYDKIFHQADTSLKR 412

  Fly   438 QIWPQFVERFGIRKVGEFYGATEGNANIMNN------DSTVGAIGFISRILPQIYPISIIKADPH 496
              |  .:|....||..|.......|.:|.:.      .:::|  |.:..|:....|     |.|.
  Rat   413 --W--LLEFAAKRKQAEVRSGIIRNNSIWDELFFNKIQASLG--GHVRMIVTGAAP-----ASPT 466

  Fly   497 TGEPLRNSQGLCE------------RCEADEPGVFV-GKIVRGNPCR-------EFLGYVDQKAS 541
            ....||.:.| |:            .|....||.:. |.:....||.       |.|.|...|..
  Rat   467 VLGFLRAALG-CQVYEGYGQTECTAGCTFTTPGDWTSGHVGAPLPCNHIKLVDAEELNYWTSKGE 530

  Fly   542 SKKVVHDVFSKGDMAFISGDLLVADERGYLYFKDR------------TGDTFRW----------- 583
            .     ::..||...|          :|||..:||            |||..:|           
  Rat   531 G-----EICVKGPNVF----------KGYLKDEDRTKEALDSDGWLHTGDIGKWLPEGTLKIIDR 580

  Fly   584 --------KGENVSTSEVEAQLSNLAGYKDVIVYGVSIPNTEGRAGMAAIYDPTREVNVSQLGVE 640
                    :||.|:..::|...........:.|:|.|:     :|.:..|..|..||        
  Rat   581 KKHIFKLAQGEYVAPEKIENIYIRSEPVAQIYVHGDSL-----KAFLVGIVVPDPEV-------- 632

  Fly   641 LAKSLPNYARPQFLRFLRKIDLTGTFK--LRKVELQQQGFNPEIIDDELFYAQPDGVYA------ 697
                :|.:|        :|..:.|.::  .:..||::     .|:||.:...:..|:::      
  Rat   633 ----MPCWA--------QKKGIEGNYQELCKSKELKK-----AILDDMVMLGKESGLHSFEQVKA 680

  Fly   698 -------------PLTPSVYERIVRNELR 713
                         .|||::  :..|.|||
  Rat   681 IYIHCDMFSVQNGLLTPTL--KAKRPELR 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp2NP_995925.2 PRK08279 115..714 CDD:236217 134/679 (20%)
AFD_class_I 163..680 CDD:302604 121/613 (20%)
Acsl6XP_006246283.2 LC-FACS_euk 141..719 CDD:341250 132/669 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342899
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.