DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp2 and Acsl3

DIOPT Version :9

Sequence 1:NP_995925.2 Gene:Fatp2 / 37657 FlyBaseID:FBgn0265187 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_476448.1 Gene:Acsl3 / 114024 RGDID:70552 Length:720 Species:Rattus norvegicus


Alignment Length:688 Identity:154/688 - (22%)
Similarity:249/688 - (36%) Gaps:180/688 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 IAAVTTPR-DTV-ALFAYIRVLLFIKRQERKNLNIGDIFESNVARQPD----KLAIVSESQQWTF 167
            :|:|..|. ||: .:|.|.:    .|.::::.|...:|.......||:    |..|:......::
  Rat    77 LASVLYPGCDTLDKVFMYAK----NKFKDKRLLGTREILNEEDEIQPNGKVFKKVILGHYNWLSY 137

  Fly   168 RQVNEHSNRVANVFHSHGYKKGDVVGLLLENRAEFV--ATWLGLSKIGVITPLINTNLRGASLQH 230
            ..|...:....|.....|.|....:.:..|.|||::  |....:....::|  :...|.|.::.|
  Rat   138 EDVFIRALDFGNGLQMLGQKPKANIAIFCETRAEWMIAAQACFMYNFQLVT--LYATLGGPAIVH 200

  Fly   231 SITVGQCTALIYGAS-FRSAVMDIAKDLPAHVGLYQFNDESNQEVVASEGLSQGLAQQLNG-LLE 293
            .:...:.|.:|.... .::.:.||...:|           ..:.::..:|.....::...| ::.
  Rat   201 GLNETEVTNIITSKELLQTKLKDIVSLVP-----------RLRHIITVDGKPPTWSEFPKGVIVH 254

  Fly   294 TAAKDK---VAAGASRADH-----HDKLVYIYTSGTTGLPKAAVITHSRYFFIAAGIHY---TLG 347
            |.|..:   |.|...:..|     .|..|.:||||:||:||..:|:||.......|:..   .||
  Rat   255 TMAAVQALGVKADVDKKAHSKPLPSDIAVIMYTSGSTGIPKGVMISHSNIIASITGMARRIPRLG 319

  Fly   348 FKDQDVFYTPLPLYHTAGGVMSMGQALLF---------------------------GSTVVIRKK 385
              ::||:...|||.|    |:.:...|:.                           |.|.|::..
  Rat   320 --EEDVYIGYLPLAH----VLELSAELVCLSHGCRIGYSSPQTLADQSSKIKKGSKGDTSVLKPT 378

  Fly   386 FSAS-GYFSDCARFQCTVGQYIGEMAR-----YILA-------------TPSAPHDRNHQVRMVF 431
            ..|: ....|  |....|...:.||:.     :|||             ||.........||.:.
  Rat   379 LMAAVPEIMD--RIYKNVMNKVNEMSAFQRNLFILAYNYKMEQISKGCSTPLCDRFVFRNVRRLL 441

  Fly   432 GNGLRPQI---------WPQFVERFGIRKVGEFYGATEGNANIMNNDSTVGAIGFISRILPQIYP 487
            |..:|..:         ..:|:.......||:.||.||          :.|| |.|:.:.     
  Rat   442 GGNIRVLLCGGAPLSATTQRFMNICFCCPVGQGYGLTE----------STGA-GTITEVW----- 490

  Fly   488 ISIIKADPHTGE---PLRNSQGLCERCEA-----DEPGVF-------VGKIVRGNPCREFLGYVD 537
                  |.:||.   ||     :|  ||.     :|.|.|       .|:|:.|.. ...:||..
  Rat   491 ------DYNTGRVGAPL-----VC--CEIKLKNWEEGGYFNTDKPHPRGEILIGGQ-NVTMGYYK 541

  Fly   538 QKASSKKVVHDVF--SKGDMAFISGDLLVADERGYLYFKDRTGDTFRWK-GENVSTSEVEAQLSN 599
            .:|.:|.   |.|  ..|.....:||:...|..|.|...||..|..:.: ||.||..:|||.|.|
  Rat   542 NEAKTKA---DFFEDENGQRWLCTGDIGEFDPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKN 603

  Fly   600 LAGYKDVIVY---------GVSIPNTEGRAGMAAI--YDPTRE--VNVSQLGVELAKSLPNYARP 651
            |....::..|         |..:||.:....:|..  ::.|.|  .|.|::..|:.|.|...|..
  Rat   604 LPLIDNICAYANSYHSYVIGFVVPNQKELTELARTKGFNGTWEELCNSSEMENEVLKVLSEAAIS 668

  Fly   652 QFLRFLR---KIDL------------TGTFKLRKVELQ 674
            ..|....   ||.|            |..|||::.||:
  Rat   669 ASLEKFEIPLKIRLSPDPWTPETGLVTDAFKLKRKELK 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp2NP_995925.2 PRK08279 115..714 CDD:236217 152/682 (22%)
AFD_class_I 163..680 CDD:302604 140/628 (22%)
Acsl3NP_476448.1 PLN02387 30..717 CDD:215217 154/688 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342893
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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