DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and HAND2

DIOPT Version :9

Sequence 1:NP_001033967.1 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_068808.1 Gene:HAND2 / 9464 HGNCID:4808 Length:217 Species:Homo sapiens


Alignment Length:181 Identity:59/181 - (32%)
Similarity:84/181 - (46%) Gaps:44/181 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 PHQQSHAQMHFQNAYRQSFEGYEPANSLNGSAYSSSDR---DDMEYARHNALSSVSDLNGGVMSP 317
            ||   |..:|        .|||..|.:...:|.:::.|   ::..|. |..|....:::....|.
Human     8 PH---HPVVH--------HEGYPFAAAAAAAAAAAASRCSHEENPYF-HGWLIGHPEMSPPDYSM 60

  Fly   318 ACLAD----DGSAGSLLDGSDAGG-------KAFRKPRRRLKRKPSKTEETDEFSNQRVMANVRE 371
            |....    .|:||  ||.|..||       .....||      |.|         :|..||.:|
Human    61 ALSYSPEYASGAAG--LDHSHYGGVPPGAGPPGLGGPR------PVK---------RRGTANRKE 108

  Fly   372 RQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSSD 421
            |:||||:|.||..|::.||.:|:| |||||:||:|||.||.:|..:|:..|
Human   109 RRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDD 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_001033967.1 HLH 363..413 CDD:278439 29/50 (58%)
HAND2NP_068808.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..116 17/54 (31%)
bHLH_TS_HAND2 100..161 CDD:381477 32/60 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149585
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5507
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
43.830

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