DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and MSC

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_005089.2 Gene:MSC / 9242 HGNCID:7321 Length:206 Species:Homo sapiens


Alignment Length:215 Identity:61/215 - (28%)
Similarity:90/215 - (41%) Gaps:37/215 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 QQQQSQQLQQQQPHQQSHAQMHFQNAYRQSFEGYEP--ANSLNGSAYSSSDRDDMEYARHNALSS 306
            ::.:.:.||::.|...|.         |....|.|.  |:..:.|:....|.|..|  ...||.:
Human    10 EEMELRGLQREYPVPASK---------RPPLRGVERSYASPSDNSSAEEEDPDGEE--ERCALGT 63

  Fly   307 VSDLNGGVMSPACLADDGSAGSLLDGSDAGGKAFRKPRRRLKRKPSKTEETDEFSNQRVMANVRE 371
            .....|.......:|..|.||    ||..||.  :||      .|:|....:...:||..||.||
Human    64 AGSAEGCKRKRPRVAGGGGAG----GSAGGGG--KKP------LPAKGSAAECKQSQRNAANARE 116

  Fly   372 RQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSS--------DISLLKA 427
            |.|.:.|:.||..|:..:|.:|.| ||||:.||:||:.||..|.::|...        .::|...
Human   117 RARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQEDRYENGYVHPVNLTWP 181

  Fly   428 LEAQGSPSAYGSASSLLSAA 447
            ....|.|.   |.:..:|||
Human   182 FVVSGRPD---SDTKEVSAA 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 27/66 (41%)
MSCNP_005089.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..115 31/127 (24%)
Nuclear localization signal. /evidence=ECO:0000255 71..76 0/4 (0%)
bHLH_TS_musculin 105..170 CDD:381546 27/64 (42%)

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