DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment twi and Tcf23

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_006504158.1 Gene:Tcf23 / 69852 MGIID:1934960 Length:216 Species:Mus musculus


Alignment Length:101 Identity:32/101 - (31%)
Similarity:42/101 - (41%) Gaps:25/101 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 KPRRRLKRKPSKTEETDEFSNQRVMA------------------------NVRERQRTQSLNDAF 382
            :.|.|:.|......|...:||.|:..                        ..|||.|.::|..||
Mouse    31 RKRSRINRTRQDLWEDTSWSNHRLSRATSAPRGTRARGTAHGRSEASPENAARERTRVKTLRQAF 95

  Fly   383 KSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRML 417
            .:||..:|.:|.| ||||:..|.|||.||..|.|.|
Mouse    96 LALQAALPAVPPDTKLSKLDVLVLATSYIAHLTRTL 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 26/80 (33%)
Tcf23XP_006504158.1 bHLH_TS_TCF23_OUT 77..132 CDD:381552 25/55 (45%)

Return to query results.
Submit another query.