powered by:
Protein Alignment twi and Tcf23
DIOPT Version :9
Sequence 1: | NP_001033967.1 |
Gene: | twi / 37655 |
FlyBaseID: | FBgn0003900 |
Length: | 490 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_001067558.2 |
Gene: | Tcf23 / 688600 |
RGDID: | 1586500 |
Length: | 215 |
Species: | Rattus norvegicus |
Alignment Length: | 114 |
Identity: | 36/114 - (31%) |
Similarity: | 47/114 - (41%) |
Gaps: | 32/114 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 329 LLDGSDAGGKAFRKPRRRLKRKPSKTEETDEFSNQRVMA------------------------NV 369
||.|:| :.|.||.|......:...:||.|:.. ..
Rat 23 LLLGTD-------RKRSRLNRTRQDLWDDTSWSNHRLSRVTSAPRRTRARGTAHGRSEASPENAA 80
Fly 370 RERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRML 417
|||.|.::|..||.:||..:|.:|.| ||||:..|.|||.||..|.|.|
Rat 81 RERTRVKTLRQAFLALQAALPAVPPDTKLSKLDVLVLATSYIAHLTRTL 129
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
twi | NP_001033967.1 |
HLH |
363..413 |
CDD:278439 |
23/74 (31%) |
Tcf23 | XP_001067558.2 |
HLH |
80..129 |
CDD:197674 |
24/48 (50%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166343465 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
Return to query results.
Submit another query.