DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Tcf24

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_008761741.2 Gene:Tcf24 / 680678 RGDID:1589398 Length:170 Species:Rattus norvegicus


Alignment Length:121 Identity:44/121 - (36%)
Similarity:53/121 - (43%) Gaps:27/121 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 ACLADDGSAGSLLDG-SDAGGKAFRKPRRRLKRKPSKTEETDEFSNQRVMAN-VRERQRTQSLND 380
            |..|.|.|.|....| :..||.|.|..                 |.:...|| .|||.|.|:|..
  Rat    23 AAAARDSSPGQTGAGPTGPGGVAARSG-----------------SGRPAAANAARERSRVQTLRH 70

  Fly   381 AFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSSDISLLKALEAQGSPS 435
            ||..||:.:|::|.| ||||:..|.|||.||..|.|       ||....:|.|.||
  Rat    71 AFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTR-------SLQDDTDAPGDPS 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 27/59 (46%)
Tcf24XP_008761741.2 bHLH_TS_TCF24 53..108 CDD:381553 27/61 (44%)

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