DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Hand2

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_073187.1 Gene:Hand2 / 64637 RGDID:621207 Length:217 Species:Rattus norvegicus


Alignment Length:181 Identity:59/181 - (32%)
Similarity:84/181 - (46%) Gaps:44/181 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 PHQQSHAQMHFQNAYRQSFEGYEPANSLNGSAYSSSDR---DDMEYARHNALSSVSDLNGGVMSP 317
            ||   |..:|        .|||..|.:...:|.:::.|   ::..|. |..|....:::....|.
  Rat     8 PH---HPVVH--------HEGYPFAAAAAAAAAAAASRCSHEENPYF-HGWLIGHPEMSPPDYSM 60

  Fly   318 ACLAD----DGSAGSLLDGSDAGG-------KAFRKPRRRLKRKPSKTEETDEFSNQRVMANVRE 371
            |....    .|:||  ||.|..||       .....||      |.|         :|..||.:|
  Rat    61 ALSYSPEYASGAAG--LDHSHYGGVPPGAGPPGLGGPR------PVK---------RRGTANRKE 108

  Fly   372 RQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSSD 421
            |:||||:|.||..|::.||.:|:| |||||:||:|||.||.:|..:|:..|
  Rat   109 RRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDD 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 31/58 (53%)
Hand2NP_073187.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..116 17/54 (31%)
bHLH_TS_HAND2 100..161 CDD:381477 32/60 (53%)

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