DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Neurog3

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_067732.1 Gene:Neurog3 / 60329 RGDID:631350 Length:214 Species:Rattus norvegicus


Alignment Length:207 Identity:58/207 - (28%)
Similarity:83/207 - (40%) Gaps:41/207 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 PHQQSHAQMHFQNAYRQSFEGYEPANSLNGSAYSSSDRDDMEYARHNALSSVSDLNGGVMSPACL 320
            ||......:......:|.|.|             :||        |..|||    |....||..:
  Rat     3 PHPLDAPTIQVSQETQQPFPG-------------ASD--------HEVLSS----NSTPPSPTLV 42

  Fly   321 ADDGSAGSLLDGSDAGGKAFRKPRRRLKRKPSKTE--ETDEFSNQRVMANVRERQRTQSLNDAFK 383
            ..|.|..   :..|..|.:.:...||..|...|:|  .:.:..::|..||.|||.|..:||.|..
  Rat    43 PRDCSEA---EAGDCRGTSRKLRARRGGRNRPKSELALSKQRRSRRKKANDRERNRMHNLNSALD 104

  Fly   384 SLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSSDISLL----------KALEAQGSPSAY 437
            :|:.::||.|.| ||:||:||:.|..||..|.:.|..:|.|..          ......||...:
  Rat   105 ALRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTLRIADHSFYGPEPPVPCGELGSPGGGSSGDW 169

  Fly   438 GSASSLLSAAAN 449
            ||..|.:|.|.:
  Rat   170 GSIYSPVSQAGS 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 26/58 (45%)
Neurog3NP_067732.1 bHLH_TS_NGN3_ATOH5 77..144 CDD:381561 26/66 (39%)

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