DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment twi and atoh7

DIOPT Version :9

Sequence 1:NP_001033967.1 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_571707.1 Gene:atoh7 / 58216 ZFINID:ZDB-GENE-000926-1 Length:134 Species:Danio rerio


Alignment Length:105 Identity:40/105 - (38%)
Similarity:54/105 - (51%) Gaps:24/105 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 PACLADDGSAGSLLDGSDAGGKAFRKPRRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDA 381
            |:| ||.||      .||:             |.|.|.|..   ..:|:.||.|||:|.|.||.|
Zfish     6 PSC-ADSGS------DSDS-------------RDPEKFESA---MRRRMAANARERKRMQGLNTA 47

  Fly   382 FKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSS 420
            |..|::::|....| ||||.:||::|..||..|.|:||.:
Zfish    48 FDRLRKVVPQWGQDKKLSKYETLQMALSYIMALNRILSDA 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_001033967.1 HLH 363..413 CDD:278439 24/50 (48%)
atoh7NP_571707.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 12/43 (28%)
HLH 29..80 CDD:278439 24/50 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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