DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment twi and atoh7

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_571707.1 Gene:atoh7 / 58216 ZFINID:ZDB-GENE-000926-1 Length:134 Species:Danio rerio


Alignment Length:105 Identity:40/105 - (38%)
Similarity:54/105 - (51%) Gaps:24/105 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 PACLADDGSAGSLLDGSDAGGKAFRKPRRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDA 381
            |:| ||.||      .||:             |.|.|.|..   ..:|:.||.|||:|.|.||.|
Zfish     6 PSC-ADSGS------DSDS-------------RDPEKFESA---MRRRMAANARERKRMQGLNTA 47

  Fly   382 FKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSS 420
            |..|::::|....| ||||.:||::|..||..|.|:||.:
Zfish    48 FDRLRKVVPQWGQDKKLSKYETLQMALSYIMALNRILSDA 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 28/59 (47%)
atoh7NP_571707.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 12/43 (28%)
bHLH_TS_ATOH7 22..90 CDD:381557 30/69 (43%)

Return to query results.
Submit another query.