DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and scxb

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_021328670.1 Gene:scxb / 567817 ZFINID:ZDB-GENE-090806-1 Length:200 Species:Danio rerio


Alignment Length:113 Identity:46/113 - (40%)
Similarity:63/113 - (55%) Gaps:22/113 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 DDGSAGSLLDGSDAGGKAFRKP------------RRRLKRKP--SKTEETDEFS--NQRVMANVR 370
            |:||.||   ||:  .|:||..            ::|...:|  ..||.....:  .||..||.|
Zfish    26 DNGSEGS---GSE--DKSFRTSSHGYGSFKLGVRKKRYSCRPLAIPTELCTPITEVRQRNTANAR 85

  Fly   371 ERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRML 417
            ||:||.|:|.||.:|:.:|||.|:| |||||:||:||:.||..|..:|
Zfish    86 ERERTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVL 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 32/56 (57%)
scxbXP_021328670.1 bHLH_SF 75..142 CDD:469605 32/59 (54%)

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