DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and atoh8

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001073460.2 Gene:atoh8 / 561606 ZFINID:ZDB-GENE-061215-7 Length:266 Species:Danio rerio


Alignment Length:218 Identity:43/218 - (19%)
Similarity:80/218 - (36%) Gaps:65/218 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 FLPLYNNQQQQSQQLQQQQPHQQSHAQMHFQNAYRQSFEGYEPANSLNGSAYSSSDRDDMEYARH 301
            :..||.|....::.|....|.:...:::                         .:.|||.  .|:
Zfish    40 YFKLYKNPHLMAETLGDGSPQETHRSEI-------------------------ITSRDDS--VRN 77

  Fly   302 NALSSVSDLNGGVMSPACLADD-----------------GSAGSLLDG----------------- 332
            :.|::..|:....::.|.:.|.                 ....|:|..                 
Zfish    78 DVLNTAVDMRINTITAAEVPDSKLRSVSEKTVNSKIVQASPQVSVLSAPQVFPLERVVLSQRAAS 142

  Fly   333 -SDAGGKAFRKPRRRLKRKPS--KTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLP- 393
             :.|||....:..|:...:||  .||.......:|::||.|||.|..:::.||::|::.:|... 
Zfish   143 QAPAGGSERAESPRKRAGEPSGVVTEIKAIQQTRRLLANARERTRVHTISAAFEALRKQVPCYSY 207

  Fly   394 SDKLSKIQTLKLATRYIDFLCRM 416
            ..||||:..|::|..||..|.::
Zfish   208 GQKLSKLAILRIACNYILSLAQL 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 20/55 (36%)
atoh8NP_001073460.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..164 5/23 (22%)
bHLH_TS_ATOH8 169..236 CDD:381427 20/62 (32%)
Basic motif, degenerate. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 175..188 6/12 (50%)
Helix-loop-helix motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 189..227 12/37 (32%)

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