Protein Alignment twi and msc

DIOPT Version :10

• Sequence 1: NP_523816.2
• Gene: twi / 37655
• FlyBaseID: FBgn0003900
• Length: 490
• Species: Drosophila melanogaster
• Sequence 2: XP_684279.3
• Gene: msc / 556396
• ZFINID: ZDB-GENE-090806-3
• Length: 160
• Species: Danio rerio
• Alignment Length: 140
• Identity: 46/140 - (32%)
• Similarity: 63/140 - (45%)
• Gaps: 31/140 - (22%)

  Fly   286 SAYSSSDRDDMEYARHNALSSVSDLNGGVMSPACLADDGSAGSLLDGSDAGGKAFRKPRRRLKR- 349
            |..|.||.:|::...|                 ||.|.....||.||...      ||:.:..|
Zfish     2 STGSVSDPEDLQSISH-----------------CLDDSEDDFSLDDGLKP------KPKSKTPRG 43

  Fly   350 ------KPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLAT 407
                  ||......|...:||..||.|||.|.:.|:.||..|:..:|.:|:| ||||:.||:||:
Zfish    44 AASNTNKPQMKLAKDGRQSQRNAANARERARMRVLSKAFSRLKTSLPWVPADTKLSKLDTLRLAS 108

  Fly   408 RYIDFLCRML 417
            .||..|.::|
Zfish   109 SYISHLRQLL 118

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
twi	NP_523816.2	bHLH_TS_TWIST	363..421	CDD:381470	27/56 (48%)
msc	XP_684279.3	bHLH_SF	60..125	CDD:469605	27/59 (46%)