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Protein Alignment twi and figla
DIOPT Version :9
Sequence 1: | NP_001033967.1 |
Gene: | twi / 37655 |
FlyBaseID: | FBgn0003900 |
Length: | 490 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001016342.1 |
Gene: | figla / 549096 |
XenbaseID: | XB-GENE-966403 |
Length: | 203 |
Species: | Xenopus tropicalis |
Alignment Length: | 155 |
Identity: | 46/155 - (29%) |
Similarity: | 67/155 - (43%) |
Gaps: | 29/155 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 346 RLKRKPSK----TEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKL 405
::||.||. .|..:|...:|..||.:||:|.:::|..|..|:.|:|.:|.| |.||:.|||.
Frog 38 KMKRLPSGHYFCMENFEEVLERRQAANAKERERIRNINSGFSKLKTIVPLIPKDRKPSKVDTLKA 102
Fly 406 ATRYIDFLCRMLSSS----------DISLLKALEAQGSPSAYGSASSLLSAAANGAEADLKCLRK 460
||.||..|..:|..: ||.|.........|...|:..:.......| |:|
Frog 103 ATEYIRLLHDILEETGGFEKVEDLPDIELTDRYAGTLIPEFRGTIPTDFRINPLG---DVK---- 160
Fly 461 ANGAPII--PPEKLSYLFGVWRMEG 483
.|.|.: |.|.:. :||..|
Frog 161 -GGIPFVIKPKEPVC----LWRAAG 180
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
twi | NP_001033967.1 |
HLH |
363..413 |
CDD:278439 |
23/50 (46%) |
figla | NP_001016342.1 |
HLH |
58..115 |
CDD:238036 |
24/56 (43%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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