DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Figla

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_575589.1 Gene:Figla / 500239 RGDID:1564754 Length:195 Species:Rattus norvegicus


Alignment Length:167 Identity:52/167 - (31%)
Similarity:69/167 - (41%) Gaps:43/167 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 RLKRKP----SKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLP-SDKLSKIQTLKL 405
            ||||.|    |.|::......:|.:||.:||:|.::||..|..|:.::|.|| |.|.||:..||.
  Rat    40 RLKRLPSGGYSTTDDLHLVLERRRVANAKERERIKNLNRGFAKLKALVPFLPQSRKPSKVDILKG 104

  Fly   406 ATRYIDFLCRMLSSSDISLLKALEAQG-----------SPSAYGSASSLLSAAA--NGAEADLKC 457
            ||.||..|..:|..:     ||.|.||           |.....|...||..|.  .|..:.|| 
  Rat   105 ATEYIRILGCVLEGA-----KASEKQGPEEQQVHSSRPSDPHVSSTRELLGNATQPTGCASGLK- 163

  Fly   458 LRKANGAPIIPPEKLSYLFGVWRMEGDAQ----HQKA 490
              |....|             |...|.::    ||.|
  Rat   164 --KEEEGP-------------WAYGGHSELYSYHQSA 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 25/58 (43%)
FiglaXP_575589.1 bHLH_TS_FIGLA 62..117 CDD:381428 24/54 (44%)

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