DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Atoh8

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001102711.1 Gene:Atoh8 / 500200 RGDID:1561512 Length:322 Species:Rattus norvegicus


Alignment Length:105 Identity:32/105 - (30%)
Similarity:54/105 - (51%) Gaps:15/105 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 PRRRLKRKPSKTEETDEF-SNQRVMANVRERQRTQSLNDAFKSLQQIIPTLP-SDKLSKIQTLKL 405
            ||:|.....:.:.|.... ..:|::||.|||.|..:::.||::|::.:|... ..||||:..|::
  Rat   211 PRKRPGEATAASTEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRI 275

  Fly   406 ATRYIDFLCRMLS---SSDISLL----------KALEAQG 432
            |..||..|.|:..   |:|.|.|          :.|:|:|
  Rat   276 ACNYILSLARLADLDYSADHSNLSFSECVQRCTRTLQAEG 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 22/61 (36%)
Atoh8NP_001102711.1 PRK12323 <50..>185 CDD:481241
bHLH_TS_ATOH8 225..292 CDD:381427 21/66 (32%)
Blue background indicates that the domain is not in the aligned region.

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