DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Bhlhe23

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001102681.1 Gene:Bhlhe23 / 499952 RGDID:1559760 Length:223 Species:Rattus norvegicus


Alignment Length:181 Identity:55/181 - (30%)
Similarity:78/181 - (43%) Gaps:29/181 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 GGVMSPACLADDGSAGSLLDGSDAGG---KAFRKPRRR--------LKRKPSKTEETDEFSNQRV 365
            ||.: ||..|....|.::....:..|   :||.:.|||        .:|:|.      |..:.|:
  Rat    44 GGDL-PAAPASRVPAATVESSGEQSGDEDEAFERRRRRRGPGVAVDARRRPR------EQRSLRL 101

  Fly   366 MANVRERQRTQSLNDAFKSLQQIIPTLPSD---KLSKIQTLKLATRYIDFLCRMLSSSDISLLKA 427
            ..|.|||:|...||||...|:.:||...|.   |||||.||.||..||  |.:..:..::..|.|
  Rat   102 SINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSKIATLLLAKNYI--LMQAQALEEMRRLVA 164

  Fly   428 LEAQGSPSAYGSASSLLSAAANGAEADLKCLRKANGAPIIP-PEKLSYLFG 477
            ...||...|...|::.|:.....|......     ||.:.| |:|.:...|
  Rat   165 YLNQGQSLAAPVAAAPLTPFGQAAVYPFTA-----GAALGPCPDKCATFSG 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 26/60 (43%)
Bhlhe23NP_001102681.1 bHLH_TS_bHLHe22_bHLHb5 99..168 CDD:381524 28/70 (40%)

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