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Protein Alignment twi and atoh1b
DIOPT Version :9
Sequence 1: | NP_001033967.1 |
Gene: | twi / 37655 |
FlyBaseID: | FBgn0003900 |
Length: | 490 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001122151.1 |
Gene: | atoh1b / 493915 |
ZFINID: | ZDB-GENE-041201-1 |
Length: | 206 |
Species: | Danio rerio |
Alignment Length: | 165 |
Identity: | 50/165 - (30%) |
Similarity: | 76/165 - (46%) |
Gaps: | 35/165 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 288 YSSSDRDDMEYARHNALSSVSDLNGGVMSPACLADDGSAGSLLDGSDAGGKAFRKPRRRLKRKP- 351
|||:..: ||| .::.|.:...:.||...::|..||| |.:|
Zfish 43 YSSAVEN---YAR---TAADSPMEKYISSPQAASEDHHAGS-------------------KARPG 82
Fly 352 SKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCR 415
||...:....::||.||.|||:|...||.||..|:.:||:|.:: ||||..||::|..||..|.
Zfish 83 SKASVSGPQRHRRVAANARERRRMHGLNRAFDKLRSVIPSLENEKKLSKYDTLQMAQIYITELS- 146
Fly 416 MLSSSDISLLKALEAQGSPSAYGSASSLLSAAANG 450
.||:.:...|:|.:..:|......|.:|
Zfish 147 -------ELLEGVVQSGAPGSQRTAIPYAIDATSG 174
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
twi | NP_001033967.1 |
HLH |
363..413 |
CDD:278439 |
25/50 (50%) |
atoh1b | NP_001122151.1 |
HLH |
92..150 |
CDD:238036 |
27/65 (42%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001055 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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