DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and net

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster


Alignment Length:376 Identity:80/376 - (21%)
Similarity:134/376 - (35%) Gaps:109/376 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 SAQSTSLELNNNN------------TSSNTNSSGNNPSGFDGQASSGSSWNEHG---KRAR--SS 155
            ||.|..:.|..|.            |:.|:.|....|        |.:|.|..|   ||.|  ||
  Fly    68 SADSKPIALVRNKRKSSEPFKVVGLTTPNSKSMPGPP--------SSASMNATGPLKKRIRYTSS 124

  Fly   156 GDYDCQTGGSLVMQPEHKKLIHQQQQQQQQ---HQQQIYVDYLPTTVDEVASAQSCPGVQSTCTS 217
            .|.........:..|.....|....:.|.:   :...|||.:              |||.:...|
  Fly   125 ADSAVVLTPPAIDSPPPNSCIPSTLRLQHEIMPNPAHIYVRH--------------PGVTTLHRS 175

  Fly   218 PQSHFDFPDEELPEHKAQVFLPLYNNQQQQSQQLQQQQPHQQSHAQMHF--QNAYRQSFEGYEPA 280
            ..:|   |::..|       |.|...::   |.:.|..|..::.:.:..  |.:.:::.:.....
  Fly   176 LAAH---PEQLEP-------LALVTTKK---QCVDQAGPKIEAFSALLIGKQPSAKKTLKERTQK 227

  Fly   281 NSLNGSAYSSSDRDDMEYARHNALSSVSDLNGGVMSPACLADDGSAGSLLDGSDAGGKAFRKPRR 345
            .|.:.|...:|..|:             |||...::|                      ..:|.:
  Fly   228 ESTSSSFLEASLSDE-------------DLNKTGLAP----------------------ISRPHQ 257

  Fly   346 RLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPS-DKLSKIQTLKLATRY 409
            ..:...:.|.|      :|:.||.|||.|..:::.|:::|:|.:|...| .||||:..|::|..|
  Fly   258 HQRNYKNMTRE------RRIEANARERTRVHTISAAYETLRQAVPAYASTQKLSKLSVLRVACSY 316

  Fly   410 IDFLCRMLSSSDISLLKALEAQGSPSAYGSASSLLSAAANGAEADLKCLRK 460
            |..|.||          |.|...:..:..|.::.|.|..:..:.:.|..||
  Fly   317 ILTLSRM----------AGEDYSADQSVPSIATCLEAVTSTIQTEGKVKRK 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 23/58 (40%)
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 27/82 (33%)

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