DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment twi and twist1

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_989415.1 Gene:twist1 / 395054 XenbaseID:XB-GENE-479802 Length:166 Species:Xenopus tropicalis


Alignment Length:150 Identity:66/150 - (44%)
Similarity:86/150 - (57%) Gaps:39/150 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 KPRRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSDKLSKIQTLKLA 406
            |..::.....|..:..:|..:|||||||||||||||||:||.:|::|||||||||||||||||||
 Frog    52 KRNKKSSSTGSSPQSFEELQSQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLA 116

  Fly   407 TRYIDFLCRMLSSSDISLLKALEAQGSPSAYGSASSLLSAAANGAEADLKCLRKANGAPIIPPEK 471
            :|||||||::|.|.:      |:::.:..:|                             :..|:
 Frog   117 SRYIDFLCQVLQSDE------LDSKMASCSY-----------------------------VAHER 146

  Fly   472 LSYLFGVWRMEG----DAQH 487
            |||.|.||||||    .|.|
 Frog   147 LSYAFSVWRMEGAWSMSASH 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 48/57 (84%)
twist1NP_989415.1 bHLH_SF 67..138 CDD:469605 50/76 (66%)

Return to query results.
Submit another query.