DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and figla

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_944601.2 Gene:figla / 387259 ZFINID:ZDB-GENE-031121-1 Length:220 Species:Danio rerio


Alignment Length:183 Identity:51/183 - (27%)
Similarity:74/183 - (40%) Gaps:64/183 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 GKAFRK-------PRRRL--------KRKPS-------------------KTEETDEFSNQRVMA 367
            ||.||.       |.|.|        ..:||                   .||:.|:...:|.:|
Zfish     7 GKKFRAIVGLMKVPERELMGDVLLRESAEPSLPVHVNIGKFVRLDDGQYIDTEDRDKAVKRRQLA 71

  Fly   368 NVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLS------------- 418
            |.:||.|.:|||..|..|::|:|.:|.| |.||:..||.||.||..|..:|:             
Zfish    72 NAKERLRVRSLNSMFSYLRRIVPVMPRDRKPSKVDMLKAATEYIRLLSAVLNHTSDKGNENANVF 136

  Fly   419 -------------SSDI-SLLKALEAQGSP--SAYGSASSLLSAAANGAEADL 455
                         .||: ::..||::..||  |...|.::.|....:||:.||
Zfish   137 LETGINYPSINPDCSDLWNMEDALDSMSSPFLSETVSLTAPLVTMTSGADEDL 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 26/84 (31%)
figlaNP_944601.2 bHLH_TS_FIGLA 68..123 CDD:381428 25/54 (46%)

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