DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and ptf1a

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_997524.1 Gene:ptf1a / 368662 ZFINID:ZDB-GENE-030616-579 Length:265 Species:Danio rerio


Alignment Length:167 Identity:54/167 - (32%)
Similarity:79/167 - (47%) Gaps:20/167 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 FQNAYRQS---FEGYEPANSLNGSAYSSSDRDDM-----EYARHNALSSVSDL----NGGVMSPA 318
            |.::|...   |..:...:.|:...:...|.|.:     ||.:.:.:|...|.    |....|.:
Zfish    14 FSSSYFDDDDFFTDHSSRDHLDTDDFLDEDVDFLTNQIQEYYKDSRISQDGDYCDVGNFSFSSSS 78

  Fly   319 CLADDGSAGSLLDGSDAGGKAFRKPRRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFK 383
            .....|.|.|..:.|........|.|||::.:.       |....|..||||||:|.||:||||:
Zfish    79 STFSYGCADSTSELSPHRDGGLLKRRRRMRSEV-------EMQQLRQAANVRERRRMQSINDAFE 136

  Fly   384 SLQQIIPTLPSDK-LSKIQTLKLATRYIDFLCRMLSS 419
            .|:..|||||.:| |||:.||:||..||:||..::.|
Zfish   137 GLRSHIPTLPYEKRLSKVDTLRLAIGYINFLAELVQS 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 33/58 (57%)
ptf1aNP_997524.1 bHLH_TS_PTF1A 117..171 CDD:381423 32/53 (60%)

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