DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Atoh7

DIOPT Version :9

Sequence 1:NP_001033967.1 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001163953.1 Gene:Atoh7 / 365564 RGDID:1304957 Length:149 Species:Rattus norvegicus


Alignment Length:122 Identity:36/122 - (29%)
Similarity:54/122 - (44%) Gaps:38/122 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   351 PSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLC 414
            |.:.|..   :.:|:.||.|||:|.|.||.||..|::::|....| ||||.:||::|..||..|.
  Rat    33 PGRLESA---ARRRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIVALT 94

  Fly   415 RMLSSSDISLLKALEAQGSPSAYGSASSLLSAAANGAEAD---LKCLRKANGAPIIP 468
            |:|:.                               ||.|   |:|.::....|.:|
  Rat    95 RILAE-------------------------------AERDWVGLRCEQRGRNHPYLP 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_001033967.1 HLH 363..413 CDD:278439 24/50 (48%)
Atoh7NP_001163953.1 HLH 54..99 CDD:197674 20/44 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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