DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and hlh-31

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001023193.2 Gene:hlh-31 / 3565632 WormBaseID:WBGene00009540 Length:164 Species:Caenorhabditis elegans


Alignment Length:138 Identity:35/138 - (25%)
Similarity:49/138 - (35%) Gaps:47/138 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 EYARHNALSSVSDLNGGVMSPACLADDGSAGSLLDGSDAGGKAFRKPRRRLKRKPSKTEETDEFS 361
            :|...:.|.|...|:|      .|:.||...|                  .|.|.||        
 Worm    48 KYMAQSGLGSQVKLSG------LLSKDGKLSS------------------RKMKSSK-------- 80

  Fly   362 NQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD---KLSKIQTLKLATRYIDFLCRMLSSSDIS 423
                   :.:|.|...||:|...|:.:||.....   |||||.||.||..:|     ::.:..|.
 Worm    81 -------LLKRCRMHDLNEALDDLRAVIPYAHGGSVRKLSKIATLLLAKNHI-----IMKAKAIE 133

  Fly   424 LLKALEAQ 431
            .|..|.:|
 Worm   134 ELSVLVSQ 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 18/60 (30%)
hlh-31NP_001023193.2 bHLH_SF 78..137 CDD:469605 22/78 (28%)

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